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GTC ON-DEMAND

Molecular Dynamics
Presentation
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VMD: High Performance Molecular Visualization and Analysis on GPUs
Abstract:

This talk will present recent successes in the use of GPUs to accelerate interactive molecular visualization and analysis tasks on desktop computers, and batch-mode simulation and analysis jobs on GPU-accelerated HPC clusters. We'll present Fermi-specific algorithms and optimizations and compare with those for other devices. We'll also present performance and performance/watt results for VMD analysis calculations on GPU clusters, and conclude with a discussion of ongoing work and future opportunities for GPU acceleration, particularly as applied to the analysis of petascale simulations of large biomolecular complexes and long simulation timescales.

 
Topics:
Molecular Dynamics
Type:
Talk
Event:
GTC Silicon Valley
Year:
2012
Session ID:
S2142
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